Information for 20-CGGCAGGCCTGGC (Motif 25)

T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
Reverse Opposite:
A T C G A G T C A G T C C T G A A T C G A T C G A G T C A G T C A G C T A T C G T A G C T A G C A C T G
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.784
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.8 +/- 13.4bp
Average Position of motif in Background36.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CGGCAGGCCTGGC
----AGGCCTNG-
 T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:forward strand
Alignment:CGGCAGGCCTGGC
----AGGCCTAG-
 T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGGCAGGCCTGGC----
---CAGGCCNNGGCCNN
 T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGCAGGCCTGGC---
-GTCATGCHTGRCTGS
 T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C A C G T A C G T A C G T
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGCAGGCCTGGC---
-CAAAGGCGTGGCCAG
 T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGCAGGCCTGGC
GCCTCAGGGCAT--
 A C G T T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCAGGCCTGGC
SCCTSAGGSCAW--
 A C G T T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGGCCTGGC
CGCCTCAGGCA----
 A C G T A C G T T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGCAGGCCTGGC
TCACCTCTGGGCAG--
 A C G T A C G T A C G T T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGGCCTGGC
AGCCTCAGGCA----
 A C G T A C G T T A G C A T C G A T C G A T G C T C G A A C T G A C T G A T G C A T G C A G C T A C T G C T A G T A G C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T