p-value: | 1e-5 |
log p-value: | -1.352e+01 |
Information Content per bp: | 1.930 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.56% |
Number of Background Sequences with motif | 5.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 34.6 +/- 27.0bp |
Average Position of motif in Background | 54.0 +/- 26.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0062.1_Sox12_1/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTGTTCAGAAAGC TAATTGTTCTAAAC-- |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------TTGTTCAGAAAGC ANNTCTATTGTTCNNNA--- |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TTGTTCAGAAAGC CNNNTATTGTTCNNNNN-- |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TTGTTCAGAAAGC TTCAATTGTTCTAAAA-- |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------TTGTTCAGAAAGC GTATCTATTGTTCTTTA--- |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TTGTTCAGAAAGC NNTTTATTGTTCTNNN--- |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTGTTCAGAAAGC ATTGTT-------- |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------TTGTTCAGAAAGC AATCAATTGTTCCGCTA-- |
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SRY/MA0084.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGTTCAGAAAGC ATTGTTTAN----- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TTGTTCAGAAAGC AANTTATTGTTCTNNA--- |
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