Information for 5-TTBTCTGGGCTTTGTC (Motif 9)

A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C
Reverse Opposite:
A T C G C T G A G A T C C G T A C G T A C T G A T C A G G T A C A G T C A G T C G T C A A T C G G T C A T C A G T C G A T G C A
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.728
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 20.3bp
Average Position of motif in Background37.6 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TTBTCTGGGCTTTGTC-
--GYCTGGYYTNTGTCA
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTBTCTGGGCTTTGTC
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTBTCTGGGCTTTGTC-
-NNATTGGACTTTNGNN
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTBTCTGGGCTTTGTC
-WDNCTGGGCA-----
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTBTCTGGGCTTTGTC-----
-----TGGACTTTGNNCTNTG
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTBTCTGGGCTTTGTC----
-----TGGACTTTGNNCTCN
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTBTCTGGGCTTTGTC---
---ATTGGACTTTGACCCC
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTBTCTGGGCTTTGTC
CTGTCTGG--------
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTBTCTGGGCTTTGTC
GTCTGTGGTTT-----
 A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTBTCTGGGCTTTGTC
VBSYGTCTGG--------
 A C G T A C G T A C G T A G C T A G C T A C G T A T G C A C G T A C T G A C T G C A T G A G T C A G C T G C A T A C G T C T A G A G C T A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T