Information for 20-TCTGATTAATAAC (Motif 28)

A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T A C G T C T G A A C G T A C G T C G T A C G T A C G A T A G T C C G T A A C T G C G T A
p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 28.8bp
Average Position of motif in Background17.2 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCTGATTAATAAC-
--TGATTRATGGCY
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PH0150.1_Pou4f3/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCTGATTAATAAC-
GACNTCATTAATAANN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TCTGATTAATAAC
--TGATTGATGA-
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTGATTAATAAC
-NTAATTAATAT-
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCTGATTAATAAC----
-NNAATTAATGACCNNN
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCTGATTAATAAC-
GANGTAATTAATTANN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C A C G T
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCTGATTAATAAC-
--TGATTTATGGCC
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C A C G T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTGATTAATAAC
--TGATTTATGGC
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCTGATTAATAAC
-CTAATTAA----
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTGATTAATAAC-
--TGATTTATGGCC
 A C G T A G T C A C G T A C T G C G T A A C G T A C G T G T C A C G T A A G C T C G T A C G T A A G T C A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C