Information for 13-MTTCCTTTGTGRC (Motif 20)

G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
Reverse Opposite:
C T A G A G T C A G T C C G T A T G A C G C T A G T C A C G T A A C T G A C T G T C G A C G T A A C G T
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.733
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif68.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets55.8 +/- 26.6bp
Average Position of motif in Background49.3 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:MTTCCTTTGTGRC
---CCTTTGTT--
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:MTTCCTTTGTGRC---
ANTCCTTTGTCTNNNN
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:MTTCCTTTGTGRC
---CCWTTGTY--
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:MTTCCTTTGTGRC
----CTTTGT---
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:MTTCCTTTGTGRC
---CCWTTGTYYB
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--MTTCCTTTGTGRC
AGGVNCCTTTGT---
 A C G T A C G T G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:MTTCCTTTGTGRC
---CCTTTGTTTT
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:MTTCCTTTGTGRC
---YCTTTGTTCC
 G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MTTCCTTTGTGRC---
NNNTCCTTTGTTCTNNN
 A C G T G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MTTCCTTTGTGRC---
TNNTCCTTTGTTCTNNT
 A C G T G T C A C G A T A G C T G T A C A G T C C G A T A C G T C G A T A C T G A C G T A C T G C T A G G A T C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T