Information for 4-AADGACAAAGSCWCCY (Motif 8)

T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
Reverse Opposite:
T C A G A C T G A T C G G C T A T A C G T A C G A G T C C G A T A C G T A C G T A C T G A C G T A G T C G A C T A C G T A C G T
p-value:1e-17
log p-value:-4.027e+01
Information Content per bp:1.637
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif110.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets58.8 +/- 24.4bp
Average Position of motif in Background45.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
-AAAACAAAGG-----
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
-AAAACAATGG-----
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
----ACAAAGGNBCCT
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
---RACAAWGG-----
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
-VRRACAAWGG-----
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
-GGAACAAAGR-----
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
---AACAAAGG-----
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AADGACAAAGSCWCCY
ATAAGAACAAAGGACTA-
 A C G T A C G T T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AADGACAAAGSCWCCY
----ACAAAG------
 T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AADGACAAAGSCWCCY
AGAAGAACAAAGGACTA-
 A C G T A C G T T G C A C G T A C T G A C T A G T G C A G T A C G T C A T G C A C G T A C T A G A T G C A T G C C G A T A T G C T G A C A G T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T