Information for 22-AAMAACTTTATTK (Motif 25)

C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G
Reverse Opposite:
G T A C G T C A C G T A A C G T C G T A T C G A G T C A A C T G A G C T A G C T A C T G C G A T A G C T
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.773
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets67.4 +/- 23.4bp
Average Position of motif in Background51.1 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAMAACTTTATTK--
AACAATGNTATTGTT
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAMAACTTTATTK
AACAGCTGTT---
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAMAACTTTATTK-
-----TTTTATTGC
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAMAACTTTATTK----
NTNAATTTTATTGNATT
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAMAACTTTATTK----
-NNANTTTTATTGGNNN
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAMAACTTTATTK---
-----TTTTATGGCTN
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAMAACTTTATTK-
----TTTTTATTGG
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAMAACTTTATTK-----
--NAATTTTATTACCNNN
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAMAACTTTATTK-
----NTTTTATGAC
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAMAACTTTATTK-
----NTTTTATTGG
 C T G A C G T A G T A C C T G A C T G A A G T C A C G T A C G T A C G T C G T A A C G T C A G T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G