Information for 6-CCAATGGGCACGCACT (Motif 4)

A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G C A G T A C T G A G T C A C T G A G C T A T C G A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 23.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAATGGGCACGCACT
AGCCAATCGG--------
 A C G T A C G T A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCAATGGGCACGCACT
NNNNTTGGGCACNNCN-
 A C G T A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCAATGGGCACGCACT
NNTNNACAATGGGANNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCAATGGGCACGCACT
TGGACCAATCAGCACTCT--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCAATGGGCACGCACT
----RGGGCACTAACY
 A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CCAATGGGCACGCACT
--------CACGCA--
 A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCAATGGGCACGCACT
-----TBGCACGCAA-
 A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCAATGGGCACGCACT----
-----GACCACGCCCTTATT
 A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCAATGGGCACGCACT---
----ANCGCGCGCCCTTNN
 A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCAATGGGCACGCACT
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A G T C A G T C C G T A G T C A A C G T C T A G A C T G T A C G A T G C C T G A A G T C A C T G A G T C G T C A A G T C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T