Information for 12-ATCAGACCATTGTAAA (Motif 9)

C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C T G A A G T C C T G A C T G A C G A T T A C G A T C G A C G T A G T C A C G T A T C G C G T A A C G T
p-value:1e-13
log p-value:-3.188e+01
Information Content per bp:1.901
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 32.5bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATCAGACCATTGTAAA
ATCACCCCAT------
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA--
-TGTTCCCATTGTGTACT
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A A C G T A C G T
A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA
ATCACCCCAT------
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA
------CCATTGTTC-
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA
------CCWTTGTY--
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA
------CCTTTGTT--
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:ATCAGACCATTGTAAA-
--------ATTGTTTAN
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATCAGACCATTGTAAA
-----NCCATTGTTY-
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA
------CCATTGTTYB
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ATCAGACCATTGTAAA--
--------GTCGTAAAAA
 C G T A C G A T A T G C C G T A A C T G C G T A A T G C A G T C C G T A A G C T A G C T C T A G A G C T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A