p-value: | 1e-15 |
log p-value: | -3.508e+01 |
Information Content per bp: | 1.682 |
Number of Target Sequences with motif | 72.0 |
Percentage of Target Sequences with motif | 10.32% |
Number of Background Sequences with motif | 1633.9 |
Percentage of Background Sequences with motif | 3.47% |
Average Position of motif in Targets | 48.8 +/- 27.0bp |
Average Position of motif in Background | 50.8 +/- 32.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAAATGGCT--- NTNNTTAAGTGGNTNAN |
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Barhl1/MA0877.1/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTAAATGGCT GCTAATTGCT- |
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PH0005.1_Barhl1/Jaspar
Match Rank: | 3 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTAAATGGCT--- GNNTTAATTGGTTGTT |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTAAATGGCT GCTAAACGGT- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAAATGGCT-- AATNTTAAGTGGNTNN |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTAAATGGCT TTAAGTGGT- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTAAATGGCT TTAAGTGGN- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 8 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTAAATGGCT TTAAGTGC-- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 9 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAAATGGCT--- NTNNTTAAGTGGTTANN |
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PH0006.1_Barhl2/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTAAATGGCT--- NNNTTAATTGGTTTTT |
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