Information for 22-ATTAACAKCTYWKKMC (Motif 23)

C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
Reverse Opposite:
A C T G A C T G G T C A G T C A C G A T C T A G C G T A C T A G G T C A A C G T A C T G A C G T C G A T G T C A C G T A A C G T
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 18.2bp
Average Position of motif in Background61.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATTAACAKCTYWKKMC
ATTAACACCT------
 C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTAACAKCTYWKKMC
-TTMACACCTT-----
 C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACAKCTYWKKMC
GTATTGACAGCTNNTT--
 A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACAKCTYWKKMC
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACAKCTYWKKMC
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACAKCTYWKKMC
TCNCTTTACAGCGNNNT--
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACAKCTYWKKMC
NTATTGACAGCTNNTT--
 A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACAKCTYWKKMC
NTATTGACAGGTNNTN--
 A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTAACAKCTYWKKMC
GATATTGACAGCTGCGT--
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACAKCTYWKKMC
NTAATTAATAT--------
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A G T C A A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T T G A C A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T