Information for 3-DGCCTTTGTTYNN (Motif 2)

C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
Reverse Opposite:
C G A T C A T G T C G A T C G A C G T A A G T C C G T A C G T A C G T A C T A G T A C G T A G C G C T A
p-value:1e-126
log p-value:-2.922e+02
Information Content per bp:1.616
Number of Target Sequences with motif347.0
Percentage of Target Sequences with motif49.71%
Number of Background Sequences with motif5806.4
Percentage of Background Sequences with motif12.33%
Average Position of motif in Targets52.8 +/- 23.0bp
Average Position of motif in Background49.9 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
--CCWTTGTYYB-
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.95
Offset:2
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
--CCWTTGTY---
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
--CCTTTGTTTT-
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.93
Offset:2
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
--YCTTTGTTCC-
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.93
Offset:2
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
--CCATTGTTTT-
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.93
Offset:2
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
--CCATTGTTNY-
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:DGCCTTTGTTYNN
-NCCATTGTTY--
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--DGCCTTTGTTYNN--
TNNTCCTTTGTTCTNNT
 A C G T A C G T C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.92
Offset:1
Orientation:forward strand
Alignment:DGCCTTTGTTYNN
-NCCATTGTTC--
 C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--DGCCTTTGTTYNN--
NNNTCCTTTGTTCTNNN
 A C G T A C G T C A G T A T C G A T G C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G C T G T A C G C T A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T