Information for 9-TTCCAAGGGGATT (Motif 15)

A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T
Reverse Opposite:
T C G A C G T A A G C T A G T C A G T C A G T C G A T C A C G T A C G T C A T G C A T G T C G A C G T A
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.775
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif32.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets35.6 +/- 26.5bp
Average Position of motif in Background57.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTCCAAGGGGATT--
----AAGAGGATTAG
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTCCAAGGGGATT------
--TTAAGGGGATTAACTAC
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAAGGGGATT
ANTCCCTNGGGAAT
 A C G T A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTCCAAGGGGATT----
--AAAAACGGATTATTG
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTCCAAGGGGATT
GTCCCCAGGGGA--
 A C G T A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTCCAAGGGGATT-----
--CGTTGGGGATTAGCCT
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTCCAAGGGGATT------
--TTAGAGGGATTAACAAT
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTCCAAGGGGATT-------
----AGGGGGATTAGCTGCC
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCCAAGGGGATT-------
---NNAAGGGATTAACGANT
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTCCAAGGGGATT---
------VRGGATTARN
 A C G T A C G T G A T C G T A C T C G A C G T A C A T G C T A G C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C