Information for 15-TAHADAACACGAGAGA (Motif 11)

C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
Reverse Opposite:
A G C T A G T C A G C T A G T C A G C T T A G C A T C G A C G T A C T G A C G T A G C T G A C T A C G T C A G T C G A T C G T A
p-value:1e-13
log p-value:-3.110e+01
Information Content per bp:1.762
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.0 +/- 22.6bp
Average Position of motif in Background62.0 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAHADAACACGAGAGA
AAAAATAACAAACGG--
 A C G T C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TAHADAACACGAGAGA
-----ATCACGTGAC-
 C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TAHADAACACGAGAGA
----GGTCACGTGG--
 C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TAHADAACACGAGAGA
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TAHADAACACGAGAGA
-----ACCACGTG---
 C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAHADAACACGAGAGA
ATATCAAAACAAAACA--
 A C G T A C G T C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TAHADAACACGAGAGA
------ACACGTGC--
 C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAHADAACACGAGAGA
AACAAACAACAAGAG---
 A C G T A C G T C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TAHADAACACGAGAGA
CAAACAACAACACCT----
 A C G T A C G T A C G T C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TAHADAACACGAGAGA-
-----CACAGCAGGGGG
 C G A T C G T A G T C A C G T A C T G A C T G A C G T A A G T C C G T A A T G C A T C G C T G A A C T G C T G A A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G