p-value: | 1e-347 |
log p-value: | -7.999e+02 |
Information Content per bp: | 1.638 |
Number of Target Sequences with motif | 224.0 |
Percentage of Target Sequences with motif | 32.09% |
Number of Background Sequences with motif | 192.8 |
Percentage of Background Sequences with motif | 0.41% |
Average Position of motif in Targets | 52.0 +/- 18.3bp |
Average Position of motif in Background | 51.8 +/- 33.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 1 |
Score: | 0.98 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTGCATRACAAWGG ATTTGCATAACAAAG- |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 2 |
Score: | 0.97 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTTGCATRACAAWGG ATTTGCATAACAATG- |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTTGCATRACAAWGG ATTTGCATAA------ |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 4 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATTTGCATRACAAWGG TAATTTGCATAA------ |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 5 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTGCATRACAAWGG ATTTGCATA------- |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 6 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTGCATRACAAWGG BTVATTWGCATA------- |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATTTGCATRACAAWGG TTCATTTGCATAT------ |
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POU2F1/MA0785.1/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATTTGCATRACAAWGG AATTTGCATANT----- |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 9 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTGCATRACAAWGG TNTAATTTGCATACNA---- |
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PH0145.1_Pou2f3/Jaspar
Match Rank: | 10 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTGCATRACAAWGG TNTAATTTGCATACNA---- |
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