p-value: | 1e-22 |
log p-value: | -5.186e+01 |
Information Content per bp: | 1.599 |
Number of Target Sequences with motif | 105.0 |
Percentage of Target Sequences with motif | 14.54% |
Number of Background Sequences with motif | 2320.5 |
Percentage of Background Sequences with motif | 4.85% |
Average Position of motif in Targets | 52.3 +/- 25.5bp |
Average Position of motif in Background | 50.3 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 1 |
Score: | 0.86 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT ---CCWTTGTY-- |
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Sox6/MA0515.1/Jaspar
Match Rank: | 2 |
Score: | 0.84 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT ---CCATTGTTTT |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 3 |
Score: | 0.84 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ABYCCTTTGTCAT--- NNNTCCTTTGTTCTNNN |
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Sox3/MA0514.1/Jaspar
Match Rank: | 4 |
Score: | 0.84 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT ---CCTTTGTTTT |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 5 |
Score: | 0.84 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ABYCCTTTGTCAT--- TNNTCCTTTGTTCTNNT |
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Sox2/MA0143.3/Jaspar
Match Rank: | 6 |
Score: | 0.83 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT ---CCTTTGTT-- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 7 |
Score: | 0.83 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT ---CCATTGTTNY |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.83 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT ---CCWTTGTYYB |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.81 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ABYCCTTTGTCAT --NCCATTGTTC- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 10 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ABYCCTTTGTCAT --NCCATTGTTY- |
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