Information for 21-GCGTGAGAAA (Motif 37)

A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.232e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 38.2bp
Average Position of motif in Background73.7 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCGTGAGAAA-
-CSTGGGAAAD
 A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGAAA
TTGCGTGCVA--
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGAAA
TGCGTG-----
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGTGAGAAA---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGAAA
GGCGGGAARN-
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGTGAGAAA
GGGCGGGAAGG-
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGTGAGAAA
AGGTGTGAAA
 A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGAAA----
ACCGTGACTAATTNN
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGAAA
TGGCGGGAAAHB
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCGTGAGAAA---
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T