Information for 16-GCCACGCAGG (Motif 31)

A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C T G G T A C C T A G C G A T A C T G C T A G A T G C
p-value:1e-7
log p-value:-1.672e+01
Information Content per bp:1.846
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif79.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets45.4 +/- 25.5bp
Average Position of motif in Background52.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCCACGCAGG
--CACGCA--
 A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCACGCAGG
TBGCACGCAA-
 A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCACGCAGG----
GCCGCGCAGTGCGT
 A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCACGCAGG
AGCCACTCAAG
 A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCACGCAGG
ACGCCCACGCA--
 A C G T A C G T A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCACGCAGG------
CGTCACGCATGACTGCA
 A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCACGCAGG
CRCCCACGCA--
 A C G T A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCACGCAGG------
CGTCACGCATGACTGCA
 A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCACGCAGG--
SCAGYCADGCATGAC
 A C G T A C G T A C G T A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCACGCAGG
----CACAGN
 A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C