Information for 19-ATTGTTAGTAGAGGAA (Motif 27)

C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C G C A T A G T C A C G T C T G A A G T C C G A T C G T A C G T A A G T C C G T A C G T A A G C T
p-value:1e-8
log p-value:-2.018e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 24.2bp
Average Position of motif in Background49.6 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTGTTAGTAGAGGAA
ATTGTTA---------
 C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.62
Offset:9
Orientation:forward strand
Alignment:ATTGTTAGTAGAGGAA
---------AGAGGAA
 C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTTAGTAGAGGAA
CTATAATTGTTAGCG------
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTGTTAGTAGAGGAA
ATTGTT----------
 C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTAGTAGAGGAA
TAATTGTTCTAAAC----
 A C G T A C G T C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATTGTTAGTAGAGGAA
TTCAATTGTTCTAAAA----
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATTGTTAGTAGAGGAA
ATTGTTTAN-------
 C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ATTGTTAGTAGAGGAA
GTATCTATTGTTCTTTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTGTTAGTAGAGGAA
AATATTAATAAAGA--
 C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTTAGTAGAGGAA
NCNTTTGTTATTTNN----
 A C G T A C G T A C G T C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T