Information for 15-CTGCTTTTTTAGA (Motif 17)

A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A
Reverse Opposite:
A G C T G T A C A C G T C T G A C G T A G T C A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 21.6bp
Average Position of motif in Background14.1 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTTTTTTAGA--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGCTTTTTTAGA-
--CCTTTTATAGNC
 A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTTTTTTAGA--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGCTTTTTTAGA
--CCWTTGTYYB-
 A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCTTTTTTAGA---
-TTCTATTTTTAGNNN
 A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCTTTTTTAGA
TACTTCCGCTTTTT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTTTTTTAGA
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTTTTTTAGA--
NNNNTTTTTTTTTNAAC
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

BCL6B/MA0731.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCTTTTTTAGA-----
-TGCTTTCTAGGAATTCA
 A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTTTTTTAGA
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T