Information for 12-TCATTGKCTG (Motif 15)

A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G
Reverse Opposite:
A T G C C G T A A T C G G T C A A G T C C G T A T G C A A C G T C A T G C G T A
p-value:1e-10
log p-value:-2.395e+01
Information Content per bp:1.749
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.40%
Number of Background Sequences with motif739.9
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets50.8 +/- 28.8bp
Average Position of motif in Background48.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCATTGKCTG-----
CCATTGTATGCAAAT
 A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCATTGKCTG--
TGATTGGCTANN
 A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCATTGKCTG
CTCATTGTC--
 A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCATTGKCTG-
---TWGTCTGV
 A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCATTGKCTG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0177.1_Sox7_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCATTGKCTG--------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCATTGKCTG--
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGKCTG
CCGATTGGCT-
 A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGKCTG
NCCATTGTTY-
 A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGKCTG
NTAATTGG---
 A C G T A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T