Information for 8-TTGATTCTGAATAMCA (Motif 7)

A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A
Reverse Opposite:
C G A T C T A G A C G T A C G T C G T A A C G T A C G T A T G C C G T A A C T G G T C A C T G A G C A T A T G C C G T A T C G A
p-value:1e-15
log p-value:-3.597e+01
Information Content per bp:1.706
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.1 +/- 19.6bp
Average Position of motif in Background45.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA-
TNNATTATGCATANNTT
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA---
----ATTTGCATAACAAAG
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA
NNTNTCATGAATGT--
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTGATTCTGAATAMCA---
----ATTTGCATAACAATG
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA--
------BTGABTGACAGS
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTGATTCTGAATAMCA
----ATTTGAATT---
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA--
------NTGATTGACAGN
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTGATTCTGAATAMCA
------ATGMATATDC
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA--
-NTTNTATGAATGTGNNC
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTGATTCTGAATAMCA
TNTAATTTGCATACNA
 A C G T G C A T A T C G C G T A G A C T A C G T G T A C A C G T A T C G G T C A G T C A A C G T T C G A G T C A A G T C C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A