Information for 19-CCTGCTCTHTTGT (Motif 29)

A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
Reverse Opposite:
G T C A A T G C G T C A C G T A C A G T C G T A C T A G G T C A A C T G A T G C C G T A A C T G A C T G
p-value:1e-8
log p-value:-2.057e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.6 +/- 27.6bp
Average Position of motif in Background35.8 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTCTHTTGT
SNGCACCTGCHS------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCTGCTCTHTTGT-----
---NNNCCATTGTGTNAN
 A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTHTTGT
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCTGCTCTHTTGT---
------CCATTGTTNY
 A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTHTTGT
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCTHTTGT
NCACCTGTN-------
 A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCTGCTCTHTTGT-
------CCWTTGTY
 A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTGCTCTHTTGT-------
---AATCAATTGTTCCGCTA
 A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGCTCTHTTGT
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTGCTCTHTTGT
NNCACCTGNN-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C A C G T A G T C C G A T G C T A A C G T A C G T A T C G A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T