Information for 9-AACAATAGCC (Motif 21)

T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
Reverse Opposite:
A C T G A C T G A G T C C G A T T G C A A C G T A C G T C T A G A C G T A G C T
p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.865
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets38.8 +/- 24.1bp
Average Position of motif in Background56.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAGCC
GAACAATGG--
 A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.80
Offset:-6
Orientation:forward strand
Alignment:------AACAATAGCC-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AACAATAGCC
RAACAATGGN-
 A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:4
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------AACAATAGCC-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAGCC
GAACAATGGN-
 A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------AACAATAGCC-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AACAATAGCC--
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AACAATAGCC
RNAACAATGG--
 A C G T A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AACAATAGCC
VRAACAATGG--
 A C G T A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAGCC
NAACAAT----
 A C G T T C G A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C G T A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T