Information for 16-CCTCCAGCCGGCTGGC (Motif 19)

A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
Reverse Opposite:
C T A G A G T C A G T C C T G A A C T G A G T C A T G C C T A G A C T G A T G C A C G T A C T G A C T G C G T A A T C G A C T G
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 15.3bp
Average Position of motif in Background37.4 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCTCCAGCCGGCTGGC
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A C G T A C G T A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCAGCCGGCTGGC---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCTCCAGCCGGCTGGC-
-------CCTGCTGAGH
 A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAGCCGGCTGGC-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCTCCAGCCGGCTGGC
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCTCCAGCCGGCTGGC-
--GGCCYCCTGCTGDGH
 A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CCTCCAGCCGGCTGGC
---------NGCTN--
 A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCTCCAGCCGGCTGGC
--GCCAGCTGBTNB--
 A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCTCCAGCCGGCTGGC
-NAACAGCTGG-----
 A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCTCCAGCCGGCTGGC
----CCCCCTGCTGTG
 A G T C A T G C C G A T A G T C G T A C C G T A A T C G A G T C A G T C A T C G A C T G A G T C G A C T A C T G C T A G G A T C
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G