Information for 13-AACAATGCTSGTTCTT (Motif 13)

G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
Reverse Opposite:
G T C A C T G A T A C G G T C A T C G A G A T C A T C G C G T A A C T G A G T C C T G A A C G T A C G T C T A G A C G T A C G T
p-value:1e-12
log p-value:-2.802e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 13.3bp
Average Position of motif in Background58.6 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACAATGCTSGTTCTT
NAACAAT----------
 A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACAATGCTSGTTCTT
AACAATGTGCAGTGTT
 G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACAATGCTSGTTCTT
AACAAT----------
 G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AACAATGCTSGTTCTT
RNAACAATGG--------
 A C G T A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AACAATGCTSGTTCTT
NNTNANAACAATTNNA------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACAATGCTSGTTCTT
GTAAACAAT----------
 A C G T A C G T A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACAATGCTSGTTCTT
VRAACAATGG--------
 A C G T A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACAATGCTSGTTCTT
TAAAAATGCTGACTT--
 A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AACAATGCTSGTTCTT
TCACGGAACAATAGGTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACAATGCTSGTTCTT
VRRACAAWGG--------
 A C G T A C G T G T C A C G T A A G T C G T C A C G T A A G C T T A C G A G T C A C G T A T G C C T A G A C G T A C G T A T G C A G C T A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T