Information for 8-TGCATAAGTATGC (Motif 11)

A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
Reverse Opposite:
C T A G A G T C C T G A C A G T C G T A G A T C C G A T A C G T C G T A A C G T A C T G A G T C C G T A
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.794
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 21.4bp
Average Position of motif in Background46.9 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------TGCATAAGTATGC
AAAATATGCATAATAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGCATAAGTATGC
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCATAAGTATGC
ATGMATATDC----
 A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCATAAGTATGC
YATGCATATRCATRT
 A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGCATAAGTATGC
ATTTGCATAA------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCATAAGTATGC
ATGAATATTC----
 A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCATAAGTATGC-
TGTATATATATACC
 A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCATAAGTATGC
ATTTGCATAT------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TGCATAAGTATGC
TTCATTTGCATAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCATAAGTATGC
ATTGCATAA------
 A C G T A C G T A C G T A C T G A G T C C G T A C G A T C G T A G C T A C A T G A C G T G C T A A G C T C T A G A G T C
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T