Information for 7-YTSTNAWTAMCAT (Motif 10)

A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T
Reverse Opposite:
C T G A C A G T C A T G A C G T C A G T T G C A G C T A A G C T A C G T T C G A A T C G G C T A T C A G
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.489
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 24.7bp
Average Position of motif in Background49.5 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT-
--BTVATTWGCATA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT-
--CTCATTTGCATW
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT--
---TAATTTGCATAA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T A C G T
A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT---
--CTAATTTGCATATT
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T A C G T A C G T
A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT--
---TAATTTGCATAA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T A C G T
A C G T A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT-
-----ATTTGCATA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT----
-TNTAATTTGCATACNA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT----
-TNTAATTTGCATACNA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT----
-TNTAATTTGCATANNN
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YTSTNAWTAMCAT-
-----ATTTGCATA
 A G T C C G A T T A G C A G C T G T C A T C G A C G A T A C G T G T C A T G C A G T A C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A