Information for 4-RSCTCCTTTGTHM (Motif 5)

C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A
Reverse Opposite:
C A G T C G T A C G T A A G T C C G T A C G T A C G T A C T A G T C A G C T G A C T A G T A G C G A C T
p-value:1e-28
log p-value:-6.590e+01
Information Content per bp:1.679
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif10.35%
Number of Background Sequences with motif216.1
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets50.6 +/- 24.0bp
Average Position of motif in Background49.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:RSCTCCTTTGTHM----
TNNTCCTTTGTTCTNNT
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.87
Offset:4
Orientation:forward strand
Alignment:RSCTCCTTTGTHM-
----CCTTTGTTTT
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:RSCTCCTTTGTHM----
NNNTCCTTTGTTCTNNN
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.87
Offset:4
Orientation:forward strand
Alignment:RSCTCCTTTGTHM-
----CCWTTGTYYB
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.86
Offset:4
Orientation:forward strand
Alignment:RSCTCCTTTGTHM-
----YCTTTGTTCC
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.85
Offset:4
Orientation:forward strand
Alignment:RSCTCCTTTGTHM
----CCWTTGTY-
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-RSCTCCTTTGTHM
AGGVNCCTTTGT--
 A C G T C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.85
Offset:5
Orientation:forward strand
Alignment:RSCTCCTTTGTHM
-----CTTTGT--
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:RSCTCCTTTGTHM----
-ANTCCTTTGTCTNNNN
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.84
Offset:4
Orientation:forward strand
Alignment:RSCTCCTTTGTHM
----CCTTTGTT-
 C T G A A T C G G A T C G A C T A G T C A G T C A C G T A C G T A C G T C T A G A C G T G C A T G T C A
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T