Information for 23-GTGGGAGACA (Motif 30)

A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
Reverse Opposite:
A C G T C T A G A G C T A G T C C G A T A T G C A G T C A G T C G C T A A G T C
p-value:1e-6
log p-value:-1.441e+01
Information Content per bp:1.825
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif36.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets66.6 +/- 25.3bp
Average Position of motif in Background46.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAGACA
NGCGTGGGCGGR-
 A C G T A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAGACA
TGCGTGGGYG---
 A C G T A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTGGGAGACA-
AGGTGNCAGACAG
 A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAGACA
AGGTGHCAGACA
 A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAGACA
GGGCGGGAAGG-
 A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTGGGAGACA
GGCGGGAARN-
 A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGGAGACA-
CGTGGGTGGTCC
 A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGGGAGACA
TGCGTGGGCGT--
 A C G T A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGAGACA
CSTGGGAAAD-
 A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGGGAGACA-
GGCGGGGGCGGGGG
 A C G T A C G T A C G T A C T G C G A T A C T G C T A G A T C G C G T A A C T G C T G A A G T C G T C A A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G