Information for 24-GMCAGCACAAAGC (Motif 23)

C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
Reverse Opposite:
A C T G T A G C C G A T A C G T A C G T A C T G C G A T A C T G A G T C A C G T A T C G C A G T G A T C
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets72.0 +/- 16.7bp
Average Position of motif in Background49.1 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GMCAGCACAAAGC
GTCAGCANNTN--
 C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GMCAGCACAAAGC
--CAGCC------
 C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GMCAGCACAAAGC
TGAGTCAGCA------
 A C G T A C G T A C G T C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GMCAGCACAAAGC
CACAGN-------
 C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMCAGCACAAAGC
NGTCAGCANTTT--
 A C G T C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GMCAGCACAAAGC
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GMCAGCACAAAGC
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GMCAGCACAAAGC
---ACATCAAAGG
 C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GMCAGCACAAAGC
---VRRACAAWGG
 C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GMCAGCACAAAGC
---GGAACAAAGR
 C A T G G T C A A T G C C G T A A C T G A G T C G C T A A G T C G T C A T G C A C G T A A T C G A G T C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G