Information for 13-AWCARTYAGT (Motif 16)

C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
Reverse Opposite:
G T C A A T G C G A C T T C A G G C T A G A T C A C G T A T C G C G A T G C A T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.636
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.40%
Number of Background Sequences with motif212.1
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets53.4 +/- 27.3bp
Average Position of motif in Background51.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----AWCARTYAGT--
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AWCARTYAGT--
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AWCARTYAGT
NAACAAT----
 A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AWCARTYAGT
CCATCAATCAAA
 A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AWCARTYAGT
AACAAT----
 C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AWCARTYAGT
NTTNAGAACAATTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AWCARTYAGT--
ATAAACAATTAAACA
 A C G T A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AWCARTYAGT
TAATCAATTA--
 A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AWCARTYAGT
HNRAATCAAT----
 A C G T A C G T A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AWCARTYAGT
GTAAACAAT----
 A C G T A C G T A C G T C G T A G C T A A T G C G T C A C T A G C G A T A G T C C T G A T A C G C A G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T