Information for 8-ATTAGCWCMTCATTAG (Motif 9)

G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
Reverse Opposite:
G T A C G C A T G C T A T C G A A C G T C T A G C G T A A C G T A C T G G C T A A C T G A T G C C G A T G T C A G T C A A C G T
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.692
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.9 +/- 23.5bp
Average Position of motif in Background60.2 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ATTAGCWCMTCATTAG
------AGCTCATTAT
 G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATTAGCWCMTCATTAG----
---NNNACCTCATTATCNTN
 G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATTAGCWCMTCATTAG----
---GCAACCTCATTATNNNN
 G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTAGCWCMTCATTAG
ATTAACACCT------
 G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ATTAGCWCMTCATTAG
NNTGTAGGTAGCANNT------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxb5/MA0904.1/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ATTAGCWCMTCATTAG
ACGGTAATTAGCTCAT------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ATTAGCWCMTCATTAG
ACGGTAATTAGCTCAT------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:ATTAGCWCMTCATTAG-
-------NNTAATTAGN
 G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

EVX2/MA0888.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ATTAGCWCMTCATTAG-
-------GGTAATTAGC
 G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

PH0081.1_Pdx1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ATTAGCWCMTCATTAG
AAGGTAATTAGCTCAT------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T C A G T C G T A A T C G A G T C C G A T G T A C G T C A C G A T G A T C G T C A A C G T C G A T C G T A C A T G
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T