p-value: | 1e-8 |
log p-value: | -2.005e+01 |
Information Content per bp: | 1.792 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.29% |
Number of Background Sequences with motif | 32.1 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 47.1 +/- 22.2bp |
Average Position of motif in Background | 47.8 +/- 29.8bp |
Strand Bias (log2 ratio + to - strand density) | 3.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox5/MA0087.1/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GTWGWRTARCAAT ------NAACAAT |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GTWGWRTARCAAT -------AACAAT |
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PB0062.1_Sox12_1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTWGWRTARCAAT-- -NTTNAGAACAATTA |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 4 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTWGWRTARCAAT--------- AATAAAGAACAATAGAATTTCA |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTWGWRTARCAAT------ ---AATGAACAATGGAATT |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 6 |
Score: | 0.72 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTWGWRTARCAAT------ --TAGTGAACAATAGATTT |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTWGWRTARCAAT---- -NNTNANAACAATTNNA |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 8 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTWGWRTARCAAT------ --TNNAGAACAATANATNN |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 9 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTWGWRTARCAAT----- --TTAAGAACAATAAATT |
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SRY/MA0084.1/Jaspar
Match Rank: | 10 |
Score: | 0.71 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTWGWRTARCAAT ----GTAAACAAT |
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