Information for 17-TAATTGTTGGGAA (Motif 21)

C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
Reverse Opposite:
A G C T A G C T A G T C G T A C A G T C C G T A G T C A G T A C C G T A G T C A A C G T A C G T G T C A
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.8 +/- 26.8bp
Average Position of motif in Background46.6 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAATTGTTGGGAA
AAAATTGTTATGAA
 A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TAATTGTTGGGAA
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAATTGTTGGGAA-
TAATTGTTCTAAAC
 C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PH0109.1_Nkx1-1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TAATTGTTGGGAA
TGCGCTAATTAGTGGGA-
 A C G T A C G T A C G T A C G T A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAATTGTTGGGAA-
TTCAATTGTTCTAAAA
 A C G T A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TAATTGTTGGGAA
CTATAATTGTTAGCG-
 A C G T A C G T A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T

Nobox/MA0125.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAATTGTTGGGAA
TAATTGGT-----
 C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGTTGGGAA
NTAATTGG------
 A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGTTGGGAA
NNTAATTGNN-----
 A C G T A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T A C G T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGTTGGGAA
NTAATTGN------
 A C G T C A G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G C T G A C T G A
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T