Information for 12-CACTAATGAK (Motif 18)

A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T
Reverse Opposite:
G T C A A C G T A T G C G T C A C G A T C G A T C G T A A C T G G C A T A C T G
p-value:1e-10
log p-value:-2.362e+01
Information Content per bp:1.748
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif249.3
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets47.3 +/- 28.2bp
Average Position of motif in Background48.1 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CACTAATGAK
CACTAATT--
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CACTAATGAK-
-NNTAATTANN
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T
A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

PH0031.1_Evx1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CACTAATGAK----
NNNCACTAATTAGTNNT
 A C G T A C G T A C G T A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T A C G T A C G T A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

PH0027.1_Emx2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CACTAATGAK----
NNCCACTAATTAGNNNT
 A C G T A C G T A C G T A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T A C G T A C G T A C G T
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

PH0039.1_Mnx1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CACTAATGAK---
NNNCACTAATTANTNN
 A C G T A C G T A C G T A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

HOXB3/MA0903.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CACTAATGAK-
-NNTAATTANN
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CACTAATGAK
--CTAATTAN
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

EMX1/MA0612.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACTAATGAK-
-CCTAATTACC
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T
A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CACTAATGAK-
-GNTAATTANN
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T
A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACTAATGAK-
-NNTAATTANN
 A G T C C G T A G T A C A C G T C G T A C G T A C A G T T A C G G T C A A C G T A C G T
A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T