Information for 13-TCAAAGGNATTAACAC (Motif 16)

C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C
Reverse Opposite:
T A C G A C G T A C T G A C G T A C G T G T C A C G T A G A C T C G T A G T A C G T A C G A C T A G C T C G A T T C A G G C T A
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.687
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets74.1 +/- 16.0bp
Average Position of motif in Background52.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC-
TTAGAGGGATTAACAAT
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC-
TTAAGGGGATTAACTAC
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TCAAAGGNATTAACAC
-----NTAATTAATAT
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.64
Offset:8
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC--
--------ATTAACACCT
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC
AAAAACCAATTAAGAA
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC-
TGAGGGGGATTAACTAT
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0172.1_Tlx2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC---
--TAATTAATTAATAACTA
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0018.1_Dbx1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC---
--TAATTAATTAATAATTA
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0071.1_Hoxc6/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC--
-CAAATTAATTAATAAAA
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCAAAGGNATTAACAC
-AAAAACCATTAAGG-
 C G A T A G T C G C T A C T G A C G T A A C T G C A T G A C G T C G T A C G A T A C G T C G T A C G T A A G T C C G T A A T G C
A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T