Information for 9-CTGCAAATAAACATTT (Motif 10)

A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A C G A T A C T G A G C T A C G T A C G T C T G A A C G T A C G T A C G T C T A G G T A C C G T A A C T G
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 25.9bp
Average Position of motif in Background54.5 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTGCAAATAAACATTT
----AAACAAACATTC
 A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTGCAAATAAACATTT
-----AATAAACAATN
 A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGCAAATAAACATTT
----AAATAAACA---
 A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAATAAACATTT
AAAAAGTAAACAAAGAC--
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAATAAACATTT
AAAGTAAACAAAAATT-
 A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGCAAATAAACATTT---
----AAGTCAGCANTTTTN
 A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAATAAACATTT
ATATGCAAATNNN-----
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAATAAACATTT
AAAATGTAAACAAACAG--
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAATAAACATTT
AAAATGTAAACAAACAG--
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGCAAATAAACATTT
---TAAGTAAACAAA-
 A G T C A C G T A C T G A G T C C G T A C G T A C G T A A G C T T G C A C G T A C T G A A G T C C G T A G A C T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T