Information for 22-TGAAGGCTTCACA (Motif 35)

A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A
Reverse Opposite:
A G C T A C T G A G C T A C T G C G T A C G T A A C T G A T G C A G T C A C G T A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 26.3bp
Average Position of motif in Background47.0 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGAAGGCTTCACA
-----GCTTCC--
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGAAGGCTTCACA
ATGATCGAATCAAA
 A C G T A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGAAGGCTTCACA----
------CTTCACACCTA
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAAGGCTTCACA
---CGGTTTCAAA
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

BATF3/MA0835.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGGCTTCACA
TGATGACGTCATCA--
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGAAGGCTTCACA----
-------TTCACACCTT
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGAAGGCTTCACA----
-------TTMACACCTT
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGAAGGCTTCACA-------
---NNTTTTCACACCTTNNN
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGAAGGCTTCACA---
------TTTCACACCT
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGAAGGCTTCACA
--CAAGCTT----
 A C G T A C T G C G T A C G T A A C T G A T C G A G T C A C G T A C G T A G T C C T G A G T A C C T G A
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T