Information for 17-TTATGGTCTTCCT (Motif 29)

A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G T G C A C G T A A C T G C G T A A G T C A G T C C G T A A C G T C G T A C G T A
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 17.1bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTATGGTCTTCCT
TTTTATGGCTN----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTATGGTCTTCCT
NNHTGTGGTTWN---
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGGTCTTCCT
NAATTTTATTACCNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATGGTCTTCCT
TTTTATTGC------
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTATGGTCTTCCT
DGWTTTATGRCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTATGGTCTTCCT
CTGTGGTTTN---
 A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTATGGTCTTCCT
GTCTGTGGTTT----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTATGGTCTTCCT
TGATTTATGGCC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTATGGTCTTCCT
TTTGCGGTTT----
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TTATGGTCTTCCT---
------ACTTCCTGNT
 A C G T A C G T C G T A A C G T A C T G A C T G A C G T A G T C C G A T A C G T G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T