Information for 1-TDGTTAATSATTAACY (Motif 1)

A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
Reverse Opposite:
C T A G C T A G A C G T G A C T C T G A G T C A G C A T A T C G C G T A C G A T G A C T C T G A T C G A G A T C G A T C T C G A
p-value:1e-125
log p-value:-2.879e+02
Information Content per bp:1.572
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif13.86%
Number of Background Sequences with motif148.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets51.5 +/- 21.4bp
Average Position of motif in Background52.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1A/MA0046.2/Jaspar

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:TDGTTAATSATTAACY
-AGTTAATGATTAACT
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
A C G T C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

HNF1B/MA0153.2/Jaspar

Match Rank:2
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:TDGTTAATSATTAACY
--GTTAATNATTAAC-
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
A C G T A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:TDGTTAATSATTAACY
---TTAATNATTAAC-
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TDGTTAATSATTAACY
-GGTTAAACATTAA--
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TDGTTAATSATTAACY--
-GATTATTAATTAACTTG
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C A C G T A C G T
A C G T C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TDGTTAATSATTAACY
-----AATAATT----
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TDGTTAATSATTAACY--
-GNTNATTAATTAACNNG
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C A C G T A C G T
A C G T C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G

PH0018.1_Dbx1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TDGTTAATSATTAACY-
TNATTATTAATTAATTA
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:TDGTTAATSATTAACY
-------YCATTAMC-
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TDGTTAATSATTAACY--
-NNTNATTAATTAATTCG
 A G C T C T A G C T A G A G C T G A C T C T G A G C T A G C A T T A G C C G T A C A G T A G C T C T G A T G C A G A T C G A T C A C G T A C G T
A C G T C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G