Information for 8-ACAAGATTAG (Motif 7)

G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G
Reverse Opposite:
A G T C A G C T C G T A G T C A C G A T A G T C G A C T A G C T C A T G A C G T
p-value:1e-13
log p-value:-3.162e+01
Information Content per bp:1.857
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif117.6
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets52.1 +/- 26.2bp
Average Position of motif in Background46.2 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ACAAGATTAG
AAGAGGATTAG
 A C G T G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:ACAAGATTAG
--RGGATTAR
 G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:ACAAGATTAG-
---GGATTAGC
 G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACAAGATTAG-
-VRGGATTARN
 G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACAAGATTAG
--NGGATTAA
 G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACAAGATTAG-
TTGCCCGGATTAGG
 A C G T A C G T A C G T G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACAAGATTAG----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACAAGATTAG----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAAGATTAG-
-NNGGATTAGN
 G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACAAGATTAG
--CGGATTAN
 G T C A G T A C C T G A C T G A A C T G C G T A A C G T A C G T C T G A A C T G
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A