p-value: | 1e-14 |
log p-value: | -3.381e+01 |
Information Content per bp: | 1.669 |
Number of Target Sequences with motif | 61.0 |
Percentage of Target Sequences with motif | 9.43% |
Number of Background Sequences with motif | 1329.9 |
Percentage of Background Sequences with motif | 2.90% |
Average Position of motif in Targets | 46.2 +/- 27.8bp |
Average Position of motif in Background | 50.0 +/- 31.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.94 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACAGCAGGG-- CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.89 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG---- DCHCAGCAGGRGGCC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.89 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGG-- CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 4 |
Score: | 0.89 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGG-- GAGCACAGCAGGACA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 5 |
Score: | 0.87 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGG-- CCACACAGCAGGAGA |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.86 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG DCTCAGCAGG- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 7 |
Score: | 0.77 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGCAGGG---- CACAGCGGGGGGTC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGCAGGG CACAGN---- |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG---- NCGCAGCGGGGGGTC |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 10 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGG---- NCNCAGCGGGGGGTC |
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