Information for 14-HCTCTCTDATHADCAG (Motif 28)

G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C C G A T A T C G G C A T A C G T C G A T C G T A A C G T G A T C C G T A A C T G C G T A C T A G C T G A A C T G C T G A
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.713
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.1 +/- 16.5bp
Average Position of motif in Background54.4 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0097.1_Lhx6_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:HCTCTCTDATHADCAG-
NNNCGCTAATTAGNNGA
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

PH0098.1_Lhx8/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:HCTCTCTDATHADCAG--
-ACCCCTAATTAGCGGTG
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G A C G T A C G T
A C G T G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:HCTCTCTDATHADCAG-
CACCGCTAATTAGCGGT
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:HCTCTCTDATHADCAG
-----CTAATTAA---
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:HCTCTCTDATHADCAG
----ACTAATTAAC--
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C A C G T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:HCTCTCTDATHADCAG
----NCTAATTAGT--
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T A C G T A C G T

Lhx8/MA0705.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:HCTCTCTDATHADCAG
-----CTAATTAG---
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:HCTCTCTDATHADCAG
----GCTAATTAAC--
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:HCTCTCTDATHADCAG
-----CTAATTAG---
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:HCTCTCTDATHADCAG-
NTTCGCTAATTAGCTNT
 G A C T G T A C A G C T G A T C G C A T A G T C A C G T C A T G G T C A A C G T G C T A C G T A C G T A A T G C C G T A A C T G A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T