Information for 14-SCCTCTGWGYRSY (Motif 23)

A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
Reverse Opposite:
C T G A A T C G A G C T C T G A A G T C C G T A A G T C C G T A A C T G C G T A C T A G A C T G A T C G
p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.3 +/- 21.7bp
Average Position of motif in Background52.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SCCTCTGWGYRSY
CCTGCTGAGH---
 A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---SCCTCTGWGYRSY
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SCCTCTGWGYRSY
ACCATCTGTT----
 A C G T A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---SCCTCTGWGYRSY
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:SCCTCTGWGYRSY
---GCTGTG----
 A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----SCCTCTGWGYRSY
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SCCTCTGWGYRSY
TCCCCTGGGGAC-
 A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---SCCTCTGWGYRSY
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SCCTCTGWGYRSY
GCCTCAGGGCAT-
 A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SCCTCTGWGYRSY
-CCTTTGTT----
 A T G C A G T C A G T C A C G T A G T C A C G T A C T G C G A T A C T G A G C T C T G A A T G C A G C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T