Information for 13-TGWTTAGCTCCCTGTR (Motif 19)

A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
Reverse Opposite:
A G C T C G T A A T G C C G T A A T C G A C T G A T C G C G T A A C T G A T G C C G A T G C T A C G T A C G T A A G T C C G T A
p-value:1e-8
log p-value:-2.058e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.7 +/- 21.1bp
Average Position of motif in Background51.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGWTTAGCTCCCTGTR
------GCTCCG----
 A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGWTTAGCTCCCTGTR
GTTAATTANCTCNN----
 A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGWTTAGCTCCCTGTR
NTAATGAGCT-------
 A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGWTTAGCTCCCTGTR
ACGGTAATTAGCTCAG----
 A C G T A C G T A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGWTTAGCTCCCTGTR
NTTGATTNNATCAN----
 A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T A C G T A C G T A C G T A C G T

PH0058.1_Hoxb3/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TGWTTAGCTCCCTGTR
TNNNACTAATTAGNTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGWTTAGCTCCCTGTR
NTGATTAAATTAN----
 A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGWTTAGCTCCCTGTR
ATTAATTANCTCAN----
 A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G A C G T A C G T A C G T A C G T

PH0050.1_Hoxa3/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGWTTAGCTCCCTGTR
ACTAATTANCNCNA----
 A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
T C G A A G T C G A C T G T C A C G T A A C G T A C G T C T G A T A G C A G T C C A G T A G T C T C G A G T C A A C G T A C G T A C G T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGWTTAGCTCCCTGTR
AAGGTAATTAGCTCAT----
 A C G T A C G T A C G T A C G T A C G T T A C G C G A T A C G T C A G T C G T A A T C G G T A C A C G T A T G C G T A C A T G C C G A T T A C G G A C T C T G A
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T A C G T A C G T A C G T