Information for 9-TTTCAGTGAC (Motif 15)

A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.966
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.5 +/- 26.3bp
Average Position of motif in Background46.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTTCAGTGAC-
---NCGTGACN
 A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGTGAC
TGGTTTCAGT---
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTGAC---
TAATTCAATGAAGTG
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTCAGTGAC--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTGAC---
-BTGABTGACAGS
 A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTGAC---
-NTGATTGACAGN
 A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTGAC
-TTAAGTGGN
 A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTGAC
AGTTTCAGTTTC
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTGAC
ACTTTCACTTTC
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTGAC
-TTAAGTGGT
 A C G T A C G T A C G T G T A C C G T A A C T G A C G T A C T G C G T A A G T C
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T