Information for 5-GAAACTATGC (Motif 6)

A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
Reverse Opposite:
T C A G A T G C C G T A G C A T C T G A A C T G A C G T C A G T A G C T T G A C
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.834
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif68.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets61.8 +/- 25.2bp
Average Position of motif in Background50.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAAACTATGC
ACTGAAACCA---
 A C G T A C G T A C G T A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAAACTATGC--
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAACTATGC
VRAACAATGG
 A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAACTATGC
AAAACAATGG
 A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GAAACTATGC
ATAAACCGAAACCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAAACTATGC
-NAACAAT--
 A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAAACTATGC
-GAACAATGG
 A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GAAACTATGC-
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAAACTATGC
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAACTATGC-
-RAACAATGGN
 A C T G C T G A G C T A C G T A A G T C G A C T C G T A A C G T A T C G A G T C A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C