Information for 3-CACYWGKGGCWGTDCY (Motif 3)

A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
Reverse Opposite:
C T G A T A C G G A T C C G T A A G T C C G A T A T C G G T A C G T A C G T A C A G T C G C A T C T A G C T A G C G A T A C T G
p-value:1e-30
log p-value:-7.035e+01
Information Content per bp:1.582
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif365.2
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets48.9 +/- 19.6bp
Average Position of motif in Background50.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACYWGKGGCWGTDCY
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACYWGKGGCWGTDCY
TGCCCNNAGGGCA-----
 A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACYWGKGGCWGTDCY
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACYWGKGGCWGTDCY
CCACCTGTTGCAT----
 A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACYWGKGGCWGTDCY
ANCCACCTGTTGCNC----
 A C G T A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CACYWGKGGCWGTDCY
NNTNCGCACCTGTNGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACYWGKGGCWGTDCY
TCCCCTGGGGAC-----
 A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACYWGKGGCWGTDCY
TCCCNNGGGACN-----
 A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACYWGKGGCWGTDCY
NNCACCTGNN--------
 A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACYWGKGGCWGTDCY
AACACCTGCT--------
 A C G T A C G T A G T C G C T A A G T C G A T C C G T A A C T G C A T G A C T G A C T G T A G C C G T A T C A G G C A T C T A G A T G C G A C T
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T