Information for 8-CGTGAGAAAC (Motif 10)

G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T C G A T A C G T G T A C A G C T A G T C G C T A T G A C C T A G
p-value:1e-7
log p-value:-1.796e+01
Information Content per bp:1.846
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif61.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets45.7 +/- 31.8bp
Average Position of motif in Background48.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGTGAGAAAC
CSTGGGAAAD
 G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CGTGAGAAAC
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGTGAGAAAC
AGGTGTGAAA-
 A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTGAGAAAC
AGGTGTGAAM-
 A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGTGAGAAAC--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGTGAGAAAC--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGTGAGAAAC
AAGGTGTGAAA-
 A C G T A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTGAGAAAC-
AGGTGHCAGACA
 A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTGAGAAAC
AGGTGTTAAT-
 A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGTGAGAAAC
TTGCGTGCVA---
 A C G T A C G T A C G T G A T C A C T G C G A T A C T G C T G A A C T G C G T A C G T A C G T A A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T